Moving beyond the physician's EHR.
Author(s): Fridsma, Doug B
DOI: 10.1093/jamia/ocv163
Author(s): Fridsma, Doug B
DOI: 10.1093/jamia/ocv163
Mobile sensor data-to-knowledge (MD2K) was chosen as one of 11 Big Data Centers of Excellence by the National Institutes of Health, as part of its Big Data-to-Knowledge initiative. MD2K is developing innovative tools to streamline the collection, integration, management, visualization, analysis, and interpretation of health data generated by mobile and wearable sensors. The goal of the big data solutions being developed by MD2K is to reliably quantify physical, biological, behavioral [...]
Author(s): Kumar, Santosh, Abowd, Gregory D, Abraham, William T, al'Absi, Mustafa, Beck, J Gayle, Chau, Duen Horng, Condie, Tyson, Conroy, David E, Ertin, Emre, Estrin, Deborah, Ganesan, Deepak, Lam, Cho, Marlin, Benjamin, Marsh, Clay B, Murphy, Susan A, Nahum-Shani, Inbal, Patrick, Kevin, Rehg, James M, Sharmin, Moushumi, Shetty, Vivek, Sim, Ida, Spring, Bonnie, Srivastava, Mani, Wetter, David W
DOI: 10.1093/jamia/ocv056
The usability of electronic health records (EHRs) continues to be a point of dissatisfaction for providers, despite certification requirements from the Office of the National Coordinator that require EHR vendors to employ a user-centered design (UCD) process. To better understand factors that contribute to poor usability, a research team visited 11 different EHR vendors in order to analyze their UCD processes and discover the specific challenges that vendors faced as [...]
Author(s): Ratwani, Raj M, Fairbanks, Rollin J, Hettinger, A Zachary, Benda, Natalie C
DOI: 10.1093/jamia/ocv050
The author sought to integrate an ontology of rare diseases with a large ontological model of radiological diagnosis.
Author(s): Kahn, Charles E
DOI: 10.1093/jamia/ocv020
To establish preferred strategies for presenting drug-drug interaction (DDI) clinical decision support alerts.
Author(s): Payne, Thomas H, Hines, Lisa E, Chan, Raymond C, Hartman, Seth, Kapusnik-Uner, Joan, Russ, Alissa L, Chaffee, Bruce W, Hartman, Christian, Tamis, Victoria, Galbreth, Brian, Glassman, Peter A, Phansalkar, Shobha, van der Sijs, Heleen, Gephart, Sheila M, Mann, Gordon, Strasberg, Howard R, Grizzle, Amy J, Brown, Mary, Kuperman, Gilad J, Steiner, Chris, Sullins, Amanda, Ryan, Hugh, Wittie, Michael A, Malone, Daniel C
DOI: 10.1093/jamia/ocv011
Electronic health records (EHRs) are increasingly used for clinical and translational research through the creation of phenotype algorithms. Currently, phenotype algorithms are most commonly represented as noncomputable descriptive documents and knowledge artifacts that detail the protocols for querying diagnoses, symptoms, procedures, medications, and/or text-driven medical concepts, and are primarily meant for human comprehension. We present desiderata for developing a computable phenotype representation model (PheRM).
Author(s): Mo, Huan, Thompson, William K, Rasmussen, Luke V, Pacheco, Jennifer A, Jiang, Guoqian, Kiefer, Richard, Zhu, Qian, Xu, Jie, Montague, Enid, Carrell, David S, Lingren, Todd, Mentch, Frank D, Ni, Yizhao, Wehbe, Firas H, Peissig, Peggy L, Tromp, Gerard, Larson, Eric B, Chute, Christopher G, Pathak, Jyotishman, Denny, Joshua C, Speltz, Peter, Kho, Abel N, Jarvik, Gail P, Bejan, Cosmin A, Williams, Marc S, Borthwick, Kenneth, Kitchner, Terrie E, Roden, Dan M, Harris, Paul A
DOI: 10.1093/jamia/ocv112
The objective of this research is to empirically explore the drivers of patients' consent to sharing of their medical records on health information exchange (HIE) platforms.
Author(s): Yaraghi, Niam, Sharman, Raj, Gopal, Ram, Singh, Ranjit, Ramesh, R
DOI: 10.1093/jamia/ocv086
We describe here the vision, motivations, and research plans of the National Institutes of Health Center for Excellence in Big Data Computing at the University of Illinois, Urbana-Champaign. The Center is organized around the construction of "Knowledge Engine for Genomics" (KnowEnG), an E-science framework for genomics where biomedical scientists will have access to powerful methods of data mining, network mining, and machine learning to extract knowledge out of genomics data [...]
Author(s): Sinha, Saurabh, Song, Jun, Weinshilboum, Richard, Jongeneel, Victor, Han, Jiawei
DOI: 10.1093/jamia/ocv090
The world's genomics data will never be stored in a single repository - rather, it will be distributed among many sites in many countries. No one site will have enough data to explain genotype to phenotype relationships in rare diseases; therefore, sites must share data. To accomplish this, the genetics community must forge common standards and protocols to make sharing and computing data among many sites a seamless activity. Through [...]
Author(s): Paten, Benedict, Diekhans, Mark, Druker, Brian J, Friend, Stephen, Guinney, Justin, Gassner, Nadine, Guttman, Mitchell, Kent, W James, Mantey, Patrick, Margolin, Adam A, Massie, Matt, Novak, Adam M, Nothaft, Frank, Pachter, Lior, Patterson, David, Smuga-Otto, Maciej, Stuart, Joshua M, Van't Veer, Laura, Wold, Barbara, Haussler, David
DOI: 10.1093/jamia/ocv047
Clinicians' ability to use and interpret genetic information depends upon how those data are displayed in electronic health records (EHRs). There is a critical need to develop systems to effectively display genetic information in EHRs and augment clinical decision support (CDS).
Author(s): Shirts, Brian H, Salama, Joseph S, Aronson, Samuel J, Chung, Wendy K, Gray, Stacy W, Hindorff, Lucia A, Jarvik, Gail P, Plon, Sharon E, Stoffel, Elena M, Tarczy-Hornoch, Peter Z, Van Allen, Eliezer M, Weck, Karen E, Chute, Christopher G, Freimuth, Robert R, Grundmeier, Robert W, Hartzler, Andrea L, Li, Rongling, Peissig, Peggy L, Peterson, Josh F, Rasmussen, Luke V, Starren, Justin B, Williams, Marc S, Overby, Casey L
DOI: 10.1093/jamia/ocv065