Correction to: Call me Dr Ishmael: trends in electronic health record notes available at emergency department visits and admissions.
[This corrects the article DOI: 10.1093/jamiaopen/ooae039.].
Author(s):
DOI: 10.1093/jamiaopen/ooae063
[This corrects the article DOI: 10.1093/jamiaopen/ooae039.].
Author(s):
DOI: 10.1093/jamiaopen/ooae063
Anaphylaxis is a severe life-threatening allergic reaction, and its accurate identification in healthcare databases can harness the potential of "Big Data" for healthcare or public health purposes.
Author(s): Kural, Kamil Can, Mazo, Ilya, Walderhaug, Mark, Santana-Quintero, Luis, Karagiannis, Konstantinos, Thompson, Elaine E, Kelman, Jeffrey A, Goud, Ravi
DOI: 10.1093/jamiaopen/ooae037
[This retracts the article DOI: 10.1093/jamiaopen/ooad090.].
Author(s):
DOI: 10.1093/jamiaopen/ooae036
Diagnosing rare diseases is an arduous and challenging process in clinical settings, resulting in the late discovery of novel variants and referral loops. To help clinicians, we built IDeRare pipelines to accelerate phenotype-genotype analysis for patients with suspected rare diseases.
Author(s): Harsono, Ivan William, Ariani, Yulia, Benyamin, Beben, Fadilah, Fadilah, Pujianto, Dwi Ari, Hafifah, Cut Nurul
DOI: 10.1093/jamiaopen/ooae052
The generation of structured documents for clinical trials is a promising application of large language models (LLMs). We share opportunities, insights, and challenges from a competitive challenge that used LLMs for automating clinical trial documentation.
Author(s): Landman, Rogier, Healey, Sean P, Loprinzo, Vittorio, Kochendoerfer, Ulrike, Winnier, Angela Russell, Henstock, Peter V, Lin, Wenyi, Chen, Aqiu, Rajendran, Arthi, Penshanwar, Sushant, Khan, Sheraz, Madhavan, Subha
DOI: 10.1093/jamiaopen/ooae043
The Multi-State EHR-Based Network for Disease Surveillance (MENDS) is a population-based chronic disease surveillance distributed data network that uses institution-specific extraction-transformation-load (ETL) routines. MENDS-on-FHIR examined using Health Language Seven's Fast Healthcare Interoperability Resources (HL7® FHIR®) and US Core Implementation Guide (US Core IG) compliant resources derived from the Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM) to create a standards-based ETL pipeline.
Author(s): Essaid, Shahim, Andre, Jeff, Brooks, Ian M, Hohman, Katherine H, Hull, Madelyne, Jackson, Sandra L, Kahn, Michael G, Kraus, Emily M, Mandadi, Neha, Martinez, Amanda K, Mui, Joyce Y, Zambarano, Bob, Soares, Andrey
DOI: 10.1093/jamiaopen/ooae045
[This corrects the article DOI: 10.1093/jamiaopen/ooae029.].
Author(s):
DOI: 10.1093/jamiaopen/ooae046
Absolute risk models estimate an individual's future disease risk over a specified time interval. Applications utilizing server-side risk tooling, the R-based iCARE (R-iCARE), to build, validate, and apply absolute risk models, face limitations in portability and privacy due to their need for circulating user data in remote servers for operation. We overcome this by porting iCARE to the web platform.
Author(s): Balasubramanian, Jeya Balaji, Choudhury, Parichoy Pal, Mukhopadhyay, Srijon, Ahearn, Thomas, Chatterjee, Nilanjan, García-Closas, Montserrat, Almeida, Jonas S
DOI: 10.1093/jamiaopen/ooae055
Electronic health record textual sources such as medication signeturs (sigs) contain valuable information that is not always available in structured form. Commonly processed through manual annotation, this repetitive and time-consuming task could be fully automated using large language models (LLMs). While most sigs include simple instructions, some include complex patterns.
Author(s): Garcia-Agundez, Augusto, Kay, Julia L, Li, Jing, Gianfrancesco, Milena, Rai, Baljeet, Hu, Angela, Schmajuk, Gabriela, Yazdany, Jinoos
DOI: 10.1093/jamiaopen/ooae051
Decision support can improve shared decision-making for breast cancer treatment, but workflow barriers have hindered widespread use of these tools. The goal of this study was to understand the workflow among breast cancer teams of clinicians, patients, and their family caregivers when making treatment decisions and identify design guidelines for informatics tools to better support treatment decision-making.
Author(s): Salwei, Megan E, Reale, Carrie
DOI: 10.1093/jamiaopen/ooae053