Supporting rigor through reproducibility.
Author(s): Sarkar, Indra Neil
DOI: 10.1093/jamiaopen/ooaa050
Author(s): Sarkar, Indra Neil
DOI: 10.1093/jamiaopen/ooaa050
This manuscript reviews the current state of veterinary medical electronic health records and the ability to aggregate and analyze large datasets from multiple organizations and clinics. We also review analytical techniques as well as research efforts into veterinary informatics with a focus on applications relevant to human and animal medicine. Our goal is to provide references and context for these resources so that researchers can identify resources of interest and [...]
Author(s): Lustgarten, Jonathan L, Zehnder, Ashley, Shipman, Wayde, Gancher, Elizabeth, Webb, Tracy L
DOI: 10.1093/jamiaopen/ooaa005
Informatics tools that support next-generation sequencing workflows are essential to deliver timely interpretation of somatic variants in cancer. Here, we describe significant updates to our laboratory developed bioinformatics pipelines and data management application termed Houston Methodist Variant Viewer (HMVV).
Author(s): Christensen, Paul A, Subedi, Sishir, Pepper, Kristi, Hendrickson, Heather L, Li, Zejuan, Thomas, Jessica S, Long, S Wesley, Olsen, Randall J
DOI: 10.1093/jamiaopen/ooaa004
Delay or failure to view test results in a hospital setting can lead to delayed diagnosis, risk of patient harm, and represents inefficiency. Factors influencing this were investigated to identify how timeliness and completeness of test review could be improved through an evidence-based redesign of the use of clinical test review software.
Author(s): Challen, Robert, Tsaneva-Atanasova, Krasimira, Edwards, Tom, Gompels, Luke, Dayer, Mark, Pitt, Martin, Danon, Leon
DOI: 10.1093/jamiaopen/ooaa003
The study sought to explore information needs arising from a gap in clinicians' knowledge that is not met by current evidence and identify possible areas of use and target groups for a future clinical decision support system (CDSS), which will guide clinicians in cases where no evidence exists.
Author(s): Ostropolets, Anna, Chen, RuiJun, Zhang, Linying, Hripcsak, George
DOI: 10.1093/jamiaopen/ooaa012
Healthcare organizations need to rapidly adapt to new technology, policy changes, evolving payment strategies, and other environmental changes. We report on the development and application of a structured methodology to support technology and process improvement in healthcare organizations, Systematic Iterative Organizational Diagnostics (SIOD). SIOD was designed to evaluate clinical work practices, diagnose technology and workflow issues, and recommend potential solutions.
Author(s): Unertl, Kim M, Novak, Laurie Lovett, Van Houten, Courtney, Brooks, JoAnn, Smith, Andrew O, Webb Harris, Joyce, Avery, Taylor, Simpson, Christopher, Lorenzi, Nancy M
DOI: 10.1093/jamiaopen/ooaa013
The objective of this study was to assess the clinical and financial impact of a quality improvement project that utilized a modified Early Warning Score (mEWS)-based clinical decision support intervention targeting early recognition of sepsis decompensation.
Author(s): Horton, Devin J, Graves, Kencee K, Kukhareva, Polina V, Johnson, Stacy A, Cedillo, Maribel, Sanford, Matthew, Dunson, William A, White, Michael, Roach, Dave, Arego, John J, Kawamoto, Kensaku
DOI: 10.1093/jamiaopen/ooaa014
Determine if deep learning detects sepsis earlier and more accurately than other models. To evaluate model performance using implementation-oriented metrics that simulate clinical practice.
Author(s): Bedoya, Armando D, Futoma, Joseph, Clement, Meredith E, Corey, Kristin, Brajer, Nathan, Lin, Anthony, Simons, Morgan G, Gao, Michael, Nichols, Marshall, Balu, Suresh, Heller, Katherine, Sendak, Mark, O'Brien, Cara
DOI: 10.1093/jamiaopen/ooaa006
One primary consideration when developing predictive models is downstream effects on future model performance. We conduct experiments to quantify the effects of experimental design choices, namely cohort selection and internal validation methods, on (estimated) real-world model performance.
Author(s): Major, Vincent J, Jethani, Neil, Aphinyanaphongs, Yindalon
DOI: 10.1093/jamiaopen/ooaa008
Our primary objectives were to examine adherence rates across two technologies (e-prescribing software and smart pill bottle) with cross-validation from alert-triggered messaging within the patient electronic health record (EHR) portal and to explore the benefits and challenges faced by atrial fibrillation (AF) patients in using a smart pill bottle.
Author(s): Toscos, Tammy, Drouin, Michelle, Pater, Jessica A, Flanagan, Mindy, Wagner, Shauna, Coupe, Amanda, Ahmed, Ryan, Mirro, Michael J
DOI: 10.1093/jamiaopen/ooaa007