Annotating and detecting phenotypic information for chronic obstructive pulmonary disease.
Chronic obstructive pulmonary disease (COPD) phenotypes cover a range of lung abnormalities. To allow text mining methods to identify pertinent and potentially complex information about these phenotypes from textual data, we have developed a novel annotated corpus, which we use to train a neural network-based named entity recognizer to detect fine-grained COPD phenotypic information.
Author(s): Ju, Meizhi, Short, Andrea D, Thompson, Paul, Bakerly, Nawar Diar, Gkoutos, Georgios V, Tsaprouni, Loukia, Ananiadou, Sophia
DOI: 10.1093/jamiaopen/ooz009