Informatics and data science approaches address significant public health problems.
Author(s): Bakken, Suzanne
DOI: 10.1093/jamia/ocad076
Author(s): Bakken, Suzanne
DOI: 10.1093/jamia/ocad076
Clinical encounter data are heterogeneous and vary greatly from institution to institution. These problems of variance affect interpretability and usability of clinical encounter data for analysis. These problems are magnified when multisite electronic health record (EHR) data are networked together. This article presents a novel, generalizable method for resolving encounter heterogeneity for analysis by combining related atomic encounters into composite "macrovisits."
Author(s): Leese, Peter, Anand, Adit, Girvin, Andrew, Manna, Amin, Patel, Saaya, Yoo, Yun Jae, Wong, Rachel, Haendel, Melissa, Chute, Christopher G, Bennett, Tellen, Hajagos, Janos, Pfaff, Emily, Moffitt, Richard
DOI: 10.1093/jamia/ocad057
The objective was to develop a dataset definition, information model, and FHIR® specification for key data elements contained in a German molecular genomics (MolGen) report to facilitate genomic and phenotype integration in electronic health records.
Author(s): Stellmach, Caroline, Sass, Julian, Auber, Bernd, Boeker, Martin, Wienker, Thomas, Heidel, Andrew J, Benary, Manuela, Schumacher, Simon, Ossowski, Stephan, Klauschen, Frederick, Möller, Yvonne, Schmutzler, Rita, Ustjanzew, Arsenij, Werner, Patrick, Tomczak, Aurelie, Hölter, Thimo, Thun, Sylvia
DOI: 10.1093/jamia/ocad061
To study the coverage and challenges in mapping 3 national and international procedure coding systems to the International Classification of Health Interventions (ICHI).
Author(s): Fung, Kin Wah, Xu, Julia, Ameye, Filip, Burelle, Lisa, MacNeil, Janice
DOI: 10.1093/jamia/ocad064
To adapt and validate an algorithm to ascertain transgender and gender diverse (TGD) patients within electronic health record (EHR) data.
Author(s): Streed, Carl G, King, Dana, Grasso, Chris, Reisner, Sari L, Mayer, Kenneth H, Jasuja, Guneet K, Poteat, Tonia, Mukherjee, Monica, Shapira-Daniels, Ayelet, Cabral, Howard, Tangpricha, Vin, Paasche-Orlow, Michael K, Benjamin, Emelia J
DOI: 10.1093/jamia/ocad039
The use of controlled medications such as opioids, stimulants, anabolic steroids, depressants, and hallucinogens has led to an increase in addiction, overdose, and death. Given the high attributes of abuse and dependency, prescription drug monitoring programs (PDMPs) were introduced in the United States as a state-level intervention.
Author(s): Mehta, Shivani, Brown, William, Ferguson, Erin, Najera, James, Pantell, Matthew S
DOI: 10.1093/jamia/ocad053
Hospital acquired infections (HAIs) are one of the top 10 leading causes of death within the United States. While current standard of HAI risk prediction utilizes only a narrow set of predefined clinical variables, we propose a graph convolutional neural network (GNN)-based model which incorporates a wide variety of clinical features.
Author(s): Tariq, Amara, Lancaster, Lin, Elugunti, Praneetha, Siebeneck, Eric, Noe, Katherine, Borah, Bijan, Moriarty, James, Banerjee, Imon, Patel, Bhavik N
DOI: 10.1093/jamia/ocad045
The 21st Century Cures Act Final Rule's information blocking provisions, which prohibited practices likely to interfere with, prevent, or materially discourage access, exchange, or use of electronic health information (EHI), began to apply to a limited set of data elements in April 2021 and expanded to all EHI in October 2022. We sought to describe hospital leaders' perceptions of the prevalence of practices that may constitute information blocking, by actor [...]
Author(s): Everson, Jordan, Healy, Daniel, Patel, Vaishali
DOI: 10.1093/jamia/ocad060
Severe infection can lead to organ dysfunction and sepsis. Identifying subphenotypes of infected patients is essential for personalized management. It is unknown how different time series clustering algorithms compare in identifying these subphenotypes.
Author(s): Bhavani, Sivasubramanium V, Xiong, Li, Pius, Abish, Semler, Matthew, Qian, Edward T, Verhoef, Philip A, Robichaux, Chad, Coopersmith, Craig M, Churpek, Matthew M
DOI: 10.1093/jamia/ocad063
The annual American College of Medical Informatics (ACMI) symposium focused discussion on the national public health information systems (PHIS) infrastructure to support public health goals. The objective of this article is to present the strengths, weaknesses, threats, and opportunities (SWOT) identified by public health and informatics leaders in attendance.
Author(s): Acharya, Jessica C, Staes, Catherine, Allen, Katie S, Hartsell, Joel, Cullen, Theresa A, Lenert, Leslie, Rucker, Donald W, Lehmann, Harold P, Dixon, Brian E
DOI: 10.1093/jamia/ocad059