Biomedical informatics: how we got here and where we are headed.
Author(s): Ohno-Machado, Lucila
DOI: 10.1136/amiajnl-2011-000363
Author(s): Ohno-Machado, Lucila
DOI: 10.1136/amiajnl-2011-000363
Healthcare providers (HCPs) use online medical information for self-directed learning and patient care. Recently, the mobile internet has emerged as a new platform for accessing medical information as it allows mobile devices to access online information in a manner compatible with their restricted storage. We investigated mobile internet usage parameters to direct the future development of mobile internet teaching websites. Nephrology On-Demand Mobile (NOD(M)) (http://www.nephrologyondemand.org) was made accessible to all [...]
Author(s): Desai, Tejas, Christiano, Cynthia, Ferris, Maria
DOI: 10.1136/amiajnl-2011-000259
Accurate knowledge of a patient's medical problems is critical for clinical decision making, quality measurement, research, billing and clinical decision support. Common structured sources of problem information include the patient problem list and billing data; however, these sources are often inaccurate or incomplete.
Author(s): Wright, Adam, Pang, Justine, Feblowitz, Joshua C, Maloney, Francine L, Wilcox, Allison R, Ramelson, Harley Z, Schneider, Louise I, Bates, David W
DOI: 10.1136/amiajnl-2011-000121
Due to the high cost of manual curation of key aspects from the scientific literature, automated methods for assisting this process are greatly desired. Here, we report a novel approach to facilitate MeSH indexing, a challenging task of assigning MeSH terms to MEDLINE citations for their archiving and retrieval.
Author(s): Huang, Minlie, Névéol, Aurélie, Lu, Zhiyong
DOI: 10.1136/amiajnl-2010-000055
The design and implementation of ImageMiner, a software platform for performing comparative analysis of expression patterns in imaged microscopy specimens such as tissue microarrays (TMAs), is described. ImageMiner is a federated system of services that provides a reliable set of analytical and data management capabilities for investigative research applications in pathology. It provides a library of image processing methods, including automated registration, segmentation, feature extraction, and classification, all of which [...]
Author(s): Foran, David J, Yang, Lin, Chen, Wenjin, Hu, Jun, Goodell, Lauri A, Reiss, Michael, Wang, Fusheng, Kurc, Tahsin, Pan, Tony, Sharma, Ashish, Saltz, Joel H
DOI: 10.1136/amiajnl-2011-000170
At present, most clinical data are exchanged between organizations within a regional system. However, people traveling abroad may need to visit a hospital, which would make international exchange of clinical data very useful.
Author(s): Li, Jing-song, Zhou, Tian-shu, Chu, Jian, Araki, Kenji, Yoshihara, Hiroyuki
DOI: 10.1136/amiajnl-2011-000111
Nearly a decade since the completion of the first draft of the human genome, the biomedical community is positioned to usher in a new era of scientific inquiry that links fundamental biological insights with clinical knowledge. Accordingly, holistic approaches are needed to develop and assess hypotheses that incorporate genotypic, phenotypic, and environmental knowledge. This perspective presents translational bioinformatics as a discipline that builds on the successes of bioinformatics and health [...]
Author(s): Sarkar, Indra Neil, Butte, Atul J, Lussier, Yves A, Tarczy-Hornoch, Peter, Ohno-Machado, Lucila
DOI: 10.1136/amiajnl-2011-000245
Author(s): Rudin, Robert S
DOI: 10.1136/amiajnl-2011-000288
In the 6 years since the National Library of Medicine began monthly releases of RxNorm, RxNorm has become a central resource for communicating about clinical drugs and supporting interoperation between drug vocabularies.
Author(s): Nelson, Stuart J, Zeng, Kelly, Kilbourne, John, Powell, Tammy, Moore, Robin
DOI: 10.1136/amiajnl-2011-000116
To describe a system for determining the assertion status of medical problems mentioned in clinical reports, which was entered in the 2010 i2b2/VA community evaluation 'Challenges in natural language processing for clinical data' for the task of classifying assertions associated with problem concepts extracted from patient records.
Author(s): Clark, Cheryl, Aberdeen, John, Coarr, Matt, Tresner-Kirsch, David, Wellner, Ben, Yeh, Alexander, Hirschman, Lynette
DOI: 10.1136/amiajnl-2011-000164