Concerning SNOMED-CT content for public health case reports.
Author(s): Wilcke, Jeffrey R, Green, Julie M, Spackman, Kent A, Martin, Michael K, Case, James T, Santamaria, Suzanne L, Zimmerman, Kurt
DOI: 10.1136/jamia.2010.003756
Author(s): Wilcke, Jeffrey R, Green, Julie M, Spackman, Kent A, Martin, Michael K, Case, James T, Santamaria, Suzanne L, Zimmerman, Kurt
DOI: 10.1136/jamia.2010.003756
To identify challenges in mapping internal International Classification of Disease, 9th edition, Clinical Modification (ICD-9-CM) encoded legacy data to Systematic Nomenclature of Medicine (SNOMED), using SNOMED-prescribed compositional approaches where appropriate, and to explore the mapping coverage provided by the US National Library of Medicine (NLM)'s SNOMED clinical core subset.
Author(s): Nadkarni, Prakash M, Darer, Jonathan A
DOI: 10.1136/jamia.2009.001057
To ascertain if outpatients with moderate chronic kidney disease (CKD) had their condition documented in their notes in the electronic health record (EHR).
Author(s): Chase, Herbert S, Radhakrishnan, Jai, Shirazian, Shayan, Rao, Maya K, Vawdrey, David K
DOI: 10.1136/jamia.2009.001396
To examine the effect of interruptions and task complexity on error rates when prescribing with computerized provider order entry (CPOE) systems, and to categorize the types of prescribing errors.
Author(s): Magrabi, Farah, Li, Simon Y W, Day, Richard O, Coiera, Enrico
DOI: 10.1136/jamia.2009.001719
This paper presents Lancet, a supervised machine-learning system that automatically extracts medication events consisting of medication names and information pertaining to their prescribed use (dosage, mode, frequency, duration and reason) from lists or narrative text in medical discharge summaries.
Author(s): Li, Zuofeng, Liu, Feifan, Antieau, Lamont, Cao, Yonggang, Yu, Hong
DOI: 10.1136/jamia.2010.004077
While essential for patient care, information related to medication is often written as free text in clinical records and, therefore, difficult to use in computerized systems. This paper describes an approach to automatically extract medication information from clinical records, which was developed to participate in the i2b2 2009 challenge, as well as different strategies to improve the extraction.
Author(s): Deléger, Louise, Grouin, Cyril, Zweigenbaum, Pierre
DOI: 10.1136/jamia.2010.003962
This article describes a system developed for the 2009 i2b2 Medication Extraction Challenge. The purpose of this challenge is to extract medication information from hospital discharge summaries.
Author(s): Yang, Hui
DOI: 10.1136/jamia.2010.003863
The authors used the i2b2 Medication Extraction Challenge to evaluate their entity extraction methods, contribute to the generation of a publicly available collection of annotated clinical notes, and start developing methods for ontology-based reasoning using structured information generated from the unstructured clinical narrative.
Author(s): Mork, James G, Bodenreider, Olivier, Demner-Fushman, Dina, Dogan, Rezarta Islamaj, Lang, François-Michel, Lu, Zhiyong, Névéol, Aurélie, Peters, Lee, Shooshan, Sonya E, Aronson, Alan R
DOI: 10.1136/jamia.2010.003970
To develop an automated system to extract medications and related information from discharge summaries as part of the 2009 i2b2 natural language processing (NLP) challenge. This task required accurate recognition of medication name, dosage, mode, frequency, duration, and reason for drug administration.
Author(s): Doan, Son, Bastarache, Lisa, Klimkowski, Sergio, Denny, Joshua C, Xu, Hua
DOI: 10.1136/jamia.2010.003855
Within the context of the Third i2b2 Workshop on Natural Language Processing Challenges for Clinical Records, the authors (also referred to as 'the i2b2 medication challenge team' or 'the i2b2 team' for short) organized a community annotation experiment.
Author(s): Uzuner, Ozlem, Solti, Imre, Xia, Fei, Cadag, Eithon
DOI: 10.1136/jamia.2010.004200