Consumer- and patient-oriented informatics innovation: continuing the legacy of Warner V. Slack.
Author(s): Bakken, Suzanne
DOI: 10.1093/jamia/ocz224
Author(s): Bakken, Suzanne
DOI: 10.1093/jamia/ocz224
The objective of this paper is to share challenges, recommendations, and lessons learned regarding the development and implementation of a Patient Safety Learning Laboratory (PSLL) project, an innovative and complex intervention comprised of a suite of Health Information Technology (HIT) tools integrated with a newly implemented Electronic Health Record (EHR) vendor system in the acute care setting at a large academic center.
Author(s): Businger, Alexandra C, Fuller, Theresa E, Schnipper, Jeffrey L, Rossetti, Sarah Collins, Schnock, Kumiko O, Rozenblum, Ronen, Dalal, Anuj K, Benneyan, James, Bates, David W, Dykes, Patricia C
DOI: 10.1093/jamia/ocz193
This article presents our approaches to extraction of medications and associated adverse drug events (ADEs) from clinical documents, which is the second track of the 2018 National NLP Clinical Challenges (n2c2) shared task.
Author(s): Wei, Qiang, Ji, Zongcheng, Li, Zhiheng, Du, Jingcheng, Wang, Jingqi, Xu, Jun, Xiang, Yang, Tiryaki, Firat, Wu, Stephen, Zhang, Yaoyun, Tao, Cui, Xu, Hua
DOI: 10.1093/jamia/ocz063
Electronic medical records (EMRs) can support medical research and discovery, but privacy risks limit the sharing of such data on a wide scale. Various approaches have been developed to mitigate risk, including record simulation via generative adversarial networks (GANs). While showing promise in certain application domains, GANs lack a principled approach for EMR data that induces subpar simulation. In this article, we improve EMR simulation through a novel pipeline that [...]
Author(s): Zhang, Ziqi, Yan, Chao, Mesa, Diego A, Sun, Jimeng, Malin, Bradley A
DOI: 10.1093/jamia/ocz161
Our objectives were to identify educational interventions designed to equip medical students or residents with knowledge or skills related to various uses of electronic health records (EHRs), summarize and synthesize the results of formal evaluations of these initiatives, and compare the aims of these initiatives with the prescribed EHR-specific competencies for undergraduate and postgraduate medical education.
Author(s): Rajaram, Akshay, Hickey, Zachary, Patel, Nimesh, Newbigging, Joseph, Wolfrom, Brent
DOI: 10.1093/jamia/ocz178
Many policymakers and advocates assume that directed and query-based health information exchange (HIE) work together to meet organizations' interoperability needs, but this is not grounded in a substantial evidence base. This study sought to clarify the relationship between the usage of these 2 approaches to HIE.
Author(s): Vest, Joshua R, Unruh, Mark A, Casalino, Lawrence P, Shapiro, Jason S
DOI: 10.1093/jamia/ocz134
The study sought to assess the feasibility of nationwide chronic disease surveillance using data aggregated through a multisite collaboration of customers of the same electronic health record (EHR) platform across the United States.
Author(s): Tarabichi, Yasir, Goyden, Jake, Liu, Rujia, Lewis, Steven, Sudano, Joseph, Kaelber, David C
DOI: 10.1093/jamia/ocz172
Academic medical centers and health systems are increasingly challenged with supporting appropriate secondary use of clinical data. Enterprise data warehouses have emerged as central resources for these data, but often require an informatician to extract meaningful information, limiting direct access by end users. To overcome this challenge, we have developed Leaf, a lightweight self-service web application for querying clinical data from heterogeneous data models and sources.
Author(s): Dobbins, Nicholas J, Spital, Clifford H, Black, Robert A, Morrison, Jason M, de Veer, Bas, Zampino, Elizabeth, Harrington, Robert D, Britt, Bethene D, Stephens, Kari A, Wilcox, Adam B, Tarczy-Hornoch, Peter, Mooney, Sean D
DOI: 10.1093/jamia/ocz165
Detecting adverse drug events (ADEs) and medications related information in clinical notes is important for both hospital medical care and medical research. We describe our clinical natural language processing (NLP) system to automatically extract medical concepts and relations related to ADEs and medications from clinical narratives. This work was part of the 2018 National NLP Clinical Challenges Shared Task and Workshop on Adverse Drug Events and Medication Extraction.
Author(s): Chen, Long, Gu, Yu, Ji, Xin, Sun, Zhiyong, Li, Haodan, Gao, Yuan, Huang, Yang
DOI: 10.1093/jamia/ocz141
Pharmacogenomics (PGx) clinical decision support integrated into the electronic health record (EHR) has the potential to provide relevant knowledge to clinicians to enable individualized care. However, past experience implementing PGx clinical decision support into multiple EHR platforms has identified important clinical, procedural, and technical challenges. Commercial EHRs have been widely criticized for the lack of readiness to implement precision medicine. Herein, we share our experiences and lessons learned implementing new [...]
Author(s): Caraballo, Pedro J, Sutton, Joseph A, Giri, Jyothsna, Wright, Jessica A, Nicholson, Wayne T, Kullo, Iftikhar J, Parkulo, Mark A, Bielinski, Suzette J, Moyer, Ann M
DOI: 10.1093/jamia/ocz177