Correction to: In with the old, in with the new: machine learning for time to event biomedical research.
Author(s):
DOI: 10.1093/jamia/ocac243
Author(s):
DOI: 10.1093/jamia/ocac243
Over 20% of US adults report they experience pain on most days or every day. Uncontrolled pain has led to increased healthcare utilization, hospitalization, emergency visits, and financial burden. Recognizing, assessing, understanding, and treating pain using artificial intelligence (AI) approaches may improve patient outcomes and healthcare resource utilization. A comprehensive synthesis of the current use and outcomes of AI-based interventions focused on pain assessment and management will guide the development [...]
Author(s): Zhang, Meina, Zhu, Linzee, Lin, Shih-Yin, Herr, Keela, Chi, Chih-Lin, Demir, Ibrahim, Dunn Lopez, Karen, Chi, Nai-Ching
DOI: 10.1093/jamia/ocac231
A previous study, PheMAP, combined independent, online resources to enable high-throughput phenotyping (HTP) using electronic health records (EHRs). However, online resources offer distinct quality descriptions of diseases which may affect phenotyping performance. We aimed to evaluate the phenotyping performance of single resource-based PheMAPs and investigate an optimized strategy for HTP.
Author(s): Wan, Nicholas C, Yaqoob, Ali A, Ong, Henry H, Zhao, Juan, Wei, Wei-Qi
DOI: 10.1093/jamia/ocac234
Many genetic variants are classified, but many more are variants of uncertain significance (VUS). Clinical observations of patients and their families may provide sufficient evidence to classify VUS. Understanding how long it takes to accumulate sufficient patient data to classify VUS can inform decisions in data sharing, disease management, and functional assay development.
Author(s): Casaletto, James, Cline, Melissa, Shirts, Brian
DOI: 10.1093/jamia/ocac232
This article describes the implementation of a privacy-preserving record linkage (PPRL) solution across PCORnet®, the National Patient-Centered Clinical Research Network.
Author(s): Marsolo, Keith, Kiernan, Daniel, Toh, Sengwee, Phua, Jasmin, Louzao, Darcy, Haynes, Kevin, Weiner, Mark, Angulo, Francisco, Bailey, Charles, Bian, Jiang, Fort, Daniel, Grannis, Shaun, Krishnamurthy, Ashok Kumar, Nair, Vinit, Rivera, Pedro, Silverstein, Jonathan, Zirkle, Maryan, Carton, Thomas
DOI: 10.1093/jamia/ocac229
Author(s):
DOI: 10.1093/jamia/ocac206
To identify and characterize clinical subgroups of hospitalized Coronavirus Disease 2019 (COVID-19) patients.
Author(s): Ta, Casey N, Zucker, Jason E, Chiu, Po-Hsiang, Fang, Yilu, Natarajan, Karthik, Weng, Chunhua
DOI: 10.1093/jamia/ocac208
COVID-19 survivors are at risk for long-term health effects, but assessing the sequelae of COVID-19 at large scales is challenging. High-throughput methods to efficiently identify new medical problems arising after acute medical events using the electronic health record (EHR) could improve surveillance for long-term consequences of acute medical problems like COVID-19.
Author(s): Kerchberger, Vern Eric, Peterson, Josh F, Wei, Wei-Qi
DOI: 10.1093/jamia/ocac159
Electronic (e)-phenotype specification by noninformaticist investigators remains a challenge. Although validation of each patient returned by e-phenotype could ensure accuracy of cohort representation, this approach is not practical. Understanding the factors leading to successful e-phenotype specification may reveal generalizable strategies leading to better results.
Author(s): Hamidi, Bashir, Flume, Patrick A, Simpson, Kit N, Alekseyenko, Alexander V
DOI: 10.1093/jamia/ocac157
Patient phenotype definitions based on terminologies are required for the computational use of electronic health records. Within UK primary care research databases, such definitions have typically been represented as flat lists of Read terms, but Systematized Nomenclature of Medicine-Clinical Terms (SNOMED CT) (a widely employed international reference terminology) enables the use of relationships between concepts, which could facilitate the phenotyping process. We implemented SNOMED CT-based phenotyping approaches and investigated their [...]
Author(s): Elkheder, Musaab, Gonzalez-Izquierdo, Arturo, Qummer Ul Arfeen, Muhammad, Kuan, Valerie, Lumbers, R Thomas, Denaxas, Spiros, Shah, Anoop D
DOI: 10.1093/jamia/ocac158