Biomedical informatics and data science: evolving fields with significant overlap.
Author(s): Brennan, Patricia Flatley, Chiang, Michael F, Ohno-Machado, Lucila
DOI: 10.1093/jamia/ocx146
Author(s): Brennan, Patricia Flatley, Chiang, Michael F, Ohno-Machado, Lucila
DOI: 10.1093/jamia/ocx146
A growing variety of diverse data sources is emerging to better inform health care delivery and health outcomes. We sought to evaluate the capacity for clinical, socioeconomic, and public health data sources to predict the need for various social service referrals among patients at a safety-net hospital.
Author(s): Kasthurirathne, Suranga N, Vest, Joshua R, Menachemi, Nir, Halverson, Paul K, Grannis, Shaun J
DOI: 10.1093/jamia/ocx130
To provide an open source, interoperable, and scalable data quality assessment tool for evaluation and visualization of completeness and conformance in electronic health record (EHR) data repositories.
Author(s): Estiri, Hossein, Stephens, Kari A, Klann, Jeffrey G, Murphy, Shawn N
DOI: 10.1093/jamia/ocx109
Outpatient clinics lack guidance for tackling modern efficiency and productivity demands. Workflow studies require large amounts of timing data that are prohibitively expensive to collect through observation or tracking devices. Electronic health records (EHRs) contain a vast amount of timing data - timestamps collected during regular use - that can be mapped to workflow steps. This study validates using EHR timestamp data to predict outpatient ophthalmology clinic workflow timings at [...]
Author(s): Hribar, Michelle R, Read-Brown, Sarah, Goldstein, Isaac H, Reznick, Leah G, Lombardi, Lorinna, Parikh, Mansi, Chamberlain, Winston, Chiang, Michael F
DOI: 10.1093/jamia/ocx098
The gap between domain experts and natural language processing expertise is a barrier to extracting understanding from clinical text. We describe a prototype tool for interactive review and revision of natural language processing models of binary concepts extracted from clinical notes. We evaluated our prototype in a user study involving 9 physicians, who used our tool to build and revise models for 2 colonoscopy quality variables. We report changes in [...]
Author(s): Trivedi, Gaurav, Pham, Phuong, Chapman, Wendy W, Hwa, Rebecca, Wiebe, Janyce, Hochheiser, Harry
DOI: 10.1093/jamia/ocx070
Understanding how to identify the social determinants of health from electronic health records (EHRs) could provide important insights to understand health or disease outcomes. We developed a methodology to capture 2 rare and severe social determinants of health, homelessness and adverse childhood experiences (ACEs), from a large EHR repository.
Author(s): Bejan, Cosmin A, Angiolillo, John, Conway, Douglas, Nash, Robertson, Shirey-Rice, Jana K, Lipworth, Loren, Cronin, Robert M, Pulley, Jill, Kripalani, Sunil, Barkin, Shari, Johnson, Kevin B, Denny, Joshua C
DOI: 10.1093/jamia/ocx059
The International Classification of Functioning, Disability and Health (ICF) is the World Health Organization's standard for describing health and health-related states. Examples of how the ICF has been used in Electronic Health Records (EHRs) have not been systematically summarized and described yet.
Author(s): Maritz, Roxanne, Aronsky, Dominik, Prodinger, Birgit
DOI: 10.4338/ACI-2017050078
Author(s): Poikonen, John, Fotsch, Edward, Lehmann, Christoph U
DOI: 10.4338/ACI-2017050081
Given the strong push to empower patients and make them partners in their health care, we evaluated the current capability of hospitals to offer health information technology that facilitates patient engagement (PE).
Author(s): Walker, Daniel M, Sieck, Cynthia J, Menser, Terri, Huerta, Timothy R, Scheck McAlearney, Ann
DOI: 10.1093/jamia/ocx043
Large electronic health record (EHR) datasets are increasingly used to facilitate research on growth, but measurement and recording errors can lead to biased results. We developed and tested an automated method for identifying implausible values in pediatric EHR growth data.
Author(s): Daymont, Carrie, Ross, Michelle E, Russell Localio, A, Fiks, Alexander G, Wasserman, Richard C, Grundmeier, Robert W
DOI: 10.1093/jamia/ocx037