Search AMIA.org

Longitudinal data in electronic health records (EHRs) represent an individual's clinical history through a sequence of codified concepts, including diagnoses, procedures, medications, and laboratory tests. Generative pretrained transformers (GPT) can leverage this data to predict future events. While fine-tuning of these models can enhance task-specific performance, it becomes costly when applied to many clinical prediction tasks. In contrast, a pretrained foundation model can be used in zero-shot forecasting setting, offering [...]

Gaps in transportation, particularly public transit, are a significant barrier to accessible, high-quality healthcare. Health systems, payors, and regulatory bodies recognize the need to identify and address these gaps. However, clinical research examining public transportation accessibility and its impacts on healthcare utilization, outcomes, and costs remains limited. Existing tools used for studying public transit are generally non-HIPAA compliant, expensive, proprietary, and/or difficult to use. A tool addressing these concerns is [...]

Automation of clinical orders in electronic health records (EHRs) has the potential to reduce clinician burden and enhance patient safety. However, determining which orders are appropriate for automation requires a structured framework to ensure clinical validity, transparency, and safety.

Text embeddings are promising for semantic tasks, such as retrieval augmented generation (RAG). However, their application in health care is underexplored due to a lack of benchmarking methods. We introduce a scalable benchmarking method to test embeddings for health-care semantic tasks.

To evaluate the accuracy, computational cost, and portability of a new natural language processing (NLP) method for extracting medication information from clinical narratives.

Acute otitis media (AOM) is a leading cause of pediatric antibiotic overuse. Safety Net Antibiotic Prescriptions (SNAPs) are recommended for antibiotic stewardship but are difficult to identify due to lack of structured documentation.

To assess whether HL7 Fast Healthcare Interoperability Resources (FHIR) can underpin a fully standards-based, end-to-end digital research architecture, demonstrate it in a live study, and quantify its benefits for interoperability and development efficiency.

Patients of different race have different outcomes following renal transplantation. Patients of different race also undergo renal transplantation at different hospitals. We used a novel decentralized multisite approach to quantitatively assess the effect of site of care on racial disparities between non-Hispanic Black (NHB) and non-Hispanic White (NHW) patients in post-transplantation survival times.

Building upon our previous work on predicting treatment retention in medications for opioid use disorder, we aimed to improve 6-month retention prediction in buprenorphine-naloxone (BUP-NAL) therapy by incorporating features derived from large language models (LLMs) applied to unstructured clinical notes.

Externalizing behaviors in children, such as aggression, hyperactivity, and defiance, are influenced by complex interplays between genetic predispositions and environmental factors, particularly parental behaviors. Unraveling these intricate causal relationships can benefit from the use of robust data-driven methods.