Correction to: In with the old, in with the new: machine learning for time to event biomedical research.
Author(s):
DOI: 10.1093/jamia/ocac243
Author(s):
DOI: 10.1093/jamia/ocac243
Over 20% of US adults report they experience pain on most days or every day. Uncontrolled pain has led to increased healthcare utilization, hospitalization, emergency visits, and financial burden. Recognizing, assessing, understanding, and treating pain using artificial intelligence (AI) approaches may improve patient outcomes and healthcare resource utilization. A comprehensive synthesis of the current use and outcomes of AI-based interventions focused on pain assessment and management will guide the development [...]
Author(s): Zhang, Meina, Zhu, Linzee, Lin, Shih-Yin, Herr, Keela, Chi, Chih-Lin, Demir, Ibrahim, Dunn Lopez, Karen, Chi, Nai-Ching
DOI: 10.1093/jamia/ocac231
A previous study, PheMAP, combined independent, online resources to enable high-throughput phenotyping (HTP) using electronic health records (EHRs). However, online resources offer distinct quality descriptions of diseases which may affect phenotyping performance. We aimed to evaluate the phenotyping performance of single resource-based PheMAPs and investigate an optimized strategy for HTP.
Author(s): Wan, Nicholas C, Yaqoob, Ali A, Ong, Henry H, Zhao, Juan, Wei, Wei-Qi
DOI: 10.1093/jamia/ocac234
Many genetic variants are classified, but many more are variants of uncertain significance (VUS). Clinical observations of patients and their families may provide sufficient evidence to classify VUS. Understanding how long it takes to accumulate sufficient patient data to classify VUS can inform decisions in data sharing, disease management, and functional assay development.
Author(s): Casaletto, James, Cline, Melissa, Shirts, Brian
DOI: 10.1093/jamia/ocac232
This article describes the implementation of a privacy-preserving record linkage (PPRL) solution across PCORnet®, the National Patient-Centered Clinical Research Network.
Author(s): Marsolo, Keith, Kiernan, Daniel, Toh, Sengwee, Phua, Jasmin, Louzao, Darcy, Haynes, Kevin, Weiner, Mark, Angulo, Francisco, Bailey, Charles, Bian, Jiang, Fort, Daniel, Grannis, Shaun, Krishnamurthy, Ashok Kumar, Nair, Vinit, Rivera, Pedro, Silverstein, Jonathan, Zirkle, Maryan, Carton, Thomas
DOI: 10.1093/jamia/ocac229
Author(s): Bakken, Suzanne
DOI: 10.1093/jamia/ocac247
For the UK Biobank, standardized phenotype codes are associated with patients who have been hospitalized but are missing for many patients who have been treated exclusively in an outpatient setting. We describe a method for phenotype recognition that imputes phenotype codes for all UK Biobank participants.
Author(s): Yang, Lu, Wang, Sheng, Altman, Russ B
DOI: 10.1093/jamia/ocac226
Clinical knowledge-enriched transformer models (eg, ClinicalBERT) have state-of-the-art results on clinical natural language processing (NLP) tasks. One of the core limitations of these transformer models is the substantial memory consumption due to their full self-attention mechanism, which leads to the performance degradation in long clinical texts. To overcome this, we propose to leverage long-sequence transformer models (eg, Longformer and BigBird), which extend the maximum input sequence length from 512 to [...]
Author(s): Li, Yikuan, Wehbe, Ramsey M, Ahmad, Faraz S, Wang, Hanyin, Luo, Yuan
DOI: 10.1093/jamia/ocac225
The aim of this study was to identify racial and ethnic disparities in patient portal offers, access, and use and to examine the role of providers in facilitating access to electronic health information (EHI) by offering patient portals and encouraging their use.
Author(s): Richwine, Chelsea, Johnson, Christian, Patel, Vaishali
DOI: 10.1093/jamia/ocac227
A literature review of capability maturity models (MMs) to inform the conceptualization, development, implementation, evaluation, and mainstreaming of MMs in digital health (DH).
Author(s): Liaw, Siaw-Teng, Godinho, Myron Anthony
DOI: 10.1093/jamia/ocac228