AMIA president's column: AMIA and HIT policy activities.
Author(s): Shortliffe, Edward H
DOI: 10.1136/amiajnl-2011-000353
Author(s): Shortliffe, Edward H
DOI: 10.1136/amiajnl-2011-000353
Electronic personal health record systems (PHRs) support patient centered healthcare by making medical records and other relevant information accessible to patients, thus assisting patients in health self-management. We reviewed the literature on PHRs including design, functionality, implementation, applications, outcomes, and benefits. We found that, because primary care physicians play a key role in patient health, PHRs are likely to be linked to physician electronic medical record systems, so PHR adoption [...]
Author(s): Archer, N, Fevrier-Thomas, U, Lokker, C, McKibbon, K A, Straus, S E
DOI: 10.1136/amiajnl-2011-000105
It is widely accepted that content-based image retrieval (CBIR) can be extremely useful for computer-aided diagnosis (CAD). However, CBIR has not been established in clinical practice yet. As a widely unattended gap of integration, a unified data concept for CBIR-based CAD results and reporting is lacking. Picture archiving and communication systems and the workflow of radiologists must be considered for successful data integration to be achieved. We suggest that CBIR [...]
Author(s): Welter, Petra, Riesmeier, Jörg, Fischer, Benedikt, Grouls, Christoph, Kuhl, Christiane, Deserno, Thomas M
DOI: 10.1136/amiajnl-2010-000011
To determine whether statistical and machine-learning methods, when applied to electronic health record (EHR) access data, could help identify suspicious (ie, potentially inappropriate) access to EHRs.
Author(s): Boxwala, Aziz A, Kim, Jihoon, Grillo, Janice M, Ohno-Machado, Lucila
DOI: 10.1136/amiajnl-2011-000217
To understand how the source of information affects different adverse event (AE) surveillance methods.
Author(s): Tinoco, Aldo, Evans, R Scott, Staes, Catherine J, Lloyd, James F, Rothschild, Jeffrey M, Haug, Peter J
DOI: 10.1136/amiajnl-2011-000187
The Child Health Improvement through Computer Automation (CHICA) system is a decision-support and electronic-medical-record system for pediatric health maintenance and disease management. The purpose of this study was to explore CHICA's ability to screen patients for disorders that have validated screening criteria--specifically tuberculosis (TB) and iron-deficiency anemia.
Author(s): Carroll, Aaron E, Biondich, Paul G, Anand, Vibha, Dugan, Tamara M, Sheley, Meena E, Xu, Shawn Z, Downs, Stephen M
DOI: 10.1136/amiajnl-2011-000088
Uncovering the dominant molecular deregulation among the multitude of pathways implicated in aggressive prostate cancer is essential to intelligently developing targeted therapies. Paradoxically, published prostate cancer gene expression signatures of poor prognosis share little overlap and thus do not reveal shared mechanisms. The authors hypothesize that, by analyzing gene signatures with quantitative models of protein-protein interactions, key pathways will be elucidated and shown to be shared.
Author(s): Chen, James L, Li, Jianrong, Stadler, Walter M, Lussier, Yves A
DOI: 10.1136/amiajnl-2011-000178
DNA biobanks linked to comprehensive electronic health records systems are potentially powerful resources for pharmacogenetic studies. This study sought to develop natural-language-processing algorithms to extract drug-dose information from clinical text, and to assess the capabilities of such tools to automate the data-extraction process for pharmacogenetic studies.
Author(s): Xu, Hua, Jiang, Min, Oetjens, Matt, Bowton, Erica A, Ramirez, Andrea H, Jeff, Janina M, Basford, Melissa A, Pulley, Jill M, Cowan, James D, Wang, Xiaoming, Ritchie, Marylyn D, Masys, Daniel R, Roden, Dan M, Crawford, Dana C, Denny, Joshua C
DOI: 10.1136/amiajnl-2011-000208
Predicting patient outcomes from genome-wide measurements holds significant promise for improving clinical care. The large number of measurements (eg, single nucleotide polymorphisms (SNPs)), however, makes this task computationally challenging. This paper evaluates the performance of an algorithm that predicts patient outcomes from genome-wide data by efficiently model averaging over an exponential number of naive Bayes (NB) models.
Author(s): Wei, Wei, Visweswaran, Shyam, Cooper, Gregory F
DOI: 10.1136/amiajnl-2011-000101
A review of 2010 research in translational bioinformatics provides much to marvel at. We have seen notable advances in personal genomics, pharmacogenetics, and sequencing. At the same time, the infrastructure for the field has burgeoned. While acknowledging that, according to researchers, the members of this field tend to be overly optimistic, the authors predict a bright future.
Author(s): Altman, Russ B, Miller, Katharine S
DOI: 10.1136/amiajnl-2011-000328