Informatics research to enable clinically relevant, personalized genomic medicine.
Author(s): Ohno-Machado, Lucila
DOI: 10.1136/amiajnl-2012-000844
Author(s): Ohno-Machado, Lucila
DOI: 10.1136/amiajnl-2012-000844
Real-time locating systems (RTLS) have the potential to enhance healthcare systems through the live tracking of assets, patients and staff. This study evaluated a commercially available RTLS system deployed in a clinical setting, with three objectives: (1) assessment of the location accuracy of the technology in a clinical setting; (2) assessment of the value of asset tracking to staff; and (3) assessment of threshold monitoring applications developed for patient tracking [...]
Author(s): Okoniewska, Barbara, Graham, Alecia, Gavrilova, Marina, Wah, Dannel, Gilgen, Jonathan, Coke, Jason, Burden, Jack, Nayyar, Shikha, Kaunda, Joseph, Yergens, Dean, Baylis, Barry, Ghali, William A, ,
DOI: 10.1136/amiajnl-2011-000560
Morphologic variations of disease are often linked to underlying molecular events and patient outcome, suggesting that quantitative morphometric analysis may provide further insight into disease mechanisms. In this paper a methodology for the subclassification of disease is developed using image analysis techniques. Morphologic signatures that represent patient-specific tumor morphology are derived from the analysis of hundreds of millions of cells in digitized whole slide images. Clustering these signatures aggregates tumors [...]
Author(s): Cooper, Lee A D, Kong, Jun, Gutman, David A, Wang, Fusheng, Gao, Jingjing, Appin, Christina, Cholleti, Sharath, Pan, Tony, Sharma, Ashish, Scarpace, Lisa, Mikkelsen, Tom, Kurc, Tahsin, Moreno, Carlos S, Brat, Daniel J, Saltz, Joel H
DOI: 10.1136/amiajnl-2011-000700
Author(s): Berg, Jeremy M
DOI: 10.1136/amiajnl-2011-000800
The performance of a classification system depends on the context in which it will be used, including the prevalence of the classes and the relative costs of different types of errors. Metrics such as accuracy are limited to the context in which the experiment was originally carried out, and metrics such as sensitivity, specificity, and receiver operating characteristic area--while independent of prevalence--do not provide a clear picture of the performance [...]
Author(s): Hripcsak, George
DOI: 10.1136/amiajnl-2011-000633
The authors developed a computer-based general medical history to be taken by patients in their homes over the internet before their first visit with their primary care doctor, and asked six doctors and their participating patients to assess this history and its effect on their subsequent visit. Forty patients began the history; 32 completed the history and post-history assessment questionnaire and were for the most part positive in their assessment [...]
Author(s): Slack, Warner V, Kowaloff, Hollis B, Davis, Roger B, Delbanco, Tom, Locke, Steven E, Safran, Charles, Bleich, Howard L
DOI: 10.1136/amiajnl-2011-000580
The relationship between diseases and their causative genes can be complex, especially in the case of polygenic diseases. Further exacerbating the challenges in their study is that many genes may be causally related to multiple diseases. This study explored the relationship between diseases through the adaptation of an approach pioneered in the context of information retrieval: vector space models.
Author(s): Sarkar, Indra Neil
DOI: 10.1136/amiajnl-2011-000480
To assess behavioral health providers' beliefs about the benefits and barriers of health information exchange (HIE).
Author(s): Shank, Nancy
DOI: 10.1136/amiajnl-2011-000374
Adverse drug events (ADEs), defined as adverse patient outcomes caused by medications, are common and difficult to detect. Electronic detection of ADEs is a promising method to identify ADEs. We performed this systematic review to characterize established electronic detection systems and their accuracy.
Author(s): Forster, Alan J, Jennings, Alison, Chow, Claire, Leeder, Ciera, van Walraven, Carl
DOI: 10.1136/amiajnl-2011-000454
Vanderbilt University has a widely adopted patient portal, MyHealthAtVanderbilt, which provides an infrastructure to deliver information that can empower patient decision making and enhance personalized healthcare. An interdisciplinary team has developed Flu Tool, a decision-support application targeted to patients with influenza-like illness and designed to be integrated into a patient portal. Flu Tool enables patients to make informed decisions about the level of care they require and guides them to [...]
Author(s): Rosenbloom, S Trent, Daniels, Titus L, Talbot, Thomas R, McClain, Taylor, Hennes, Robert, Stenner, Shane, Muse, Sue, Jirjis, Jim, Purcell Jackson, Gretchen
DOI: 10.1136/amiajnl-2011-000382