The maturation of clinical research informatics as a subdomain of biomedical informatics.
Author(s): Bakken, Suzanne
DOI: 10.1093/jamia/ocaa312
Author(s): Bakken, Suzanne
DOI: 10.1093/jamia/ocaa312
Determination of appropriate endoscopy sedation strategy is an important preprocedural consideration. To address manual workflow gaps that lead to sedation-type order errors at our institution, we designed and implemented a clinical decision support system (CDSS) to review orders for patients undergoing outpatient endoscopy.
Author(s): Shen, Lin, Wright, Adam, Lee, Linda S, Jajoo, Kunal, Nayor, Jennifer, Landman, Adam
DOI: 10.1093/jamia/ocaa250
Informative presence (IP) is the phenomenon whereby the presence or absence of patient data is potentially informative with respect to their health condition, with informative observation (IO) being the longitudinal equivalent. These phenomena predominantly exist within routinely collected healthcare data, in which data collection is driven by the clinical requirements of patients and clinicians. The extent to which IP and IO are considered when using such data to develop clinical [...]
Author(s): Sisk, Rose, Lin, Lijing, Sperrin, Matthew, Barrett, Jessica K, Tom, Brian, Diaz-Ordaz, Karla, Peek, Niels, Martin, Glen P
DOI: 10.1093/jamia/ocaa242
Clinical research informatics tools are necessary to support comprehensive studies of infectious diseases. The National Institute of Allergy and Infectious Diseases (NIAID) developed the publicly accessible Tuberculosis Data Exploration Portal (TB DEPOT) to address the complex etiology of tuberculosis (TB).
Author(s): Long, Alyssa, Glogowski, Alexander, Meppiel, Matthew, De Vito, Lisa, Engle, Eric, Harris, Michael, Ha, Grace, Schneider, Darren, Gabrielian, Andrei, Hurt, Darrell E, Rosenthal, Alex
DOI: 10.1093/jamia/ocaa228
Drug combination screening has advantages in identifying cancer treatment options with higher efficacy without degradation in terms of safety. A key challenge is that the accumulated number of observations in in-vitro drug responses varies greatly among different cancer types, where some tissues are more understudied than the others. Thus, we aim to develop a drug synergy prediction model for understudied tissues as a way of overcoming data scarcity problems.
Author(s): Kim, Yejin, Zheng, Shuyu, Tang, Jing, Jim Zheng, Wenjin, Li, Zhao, Jiang, Xiaoqian
DOI: 10.1093/jamia/ocaa212
This research aims to evaluate the impact of eligibility criteria on recruitment and observable clinical outcomes of COVID-19 clinical trials using electronic health record (EHR) data.
Author(s): Kim, Jae Hyun, Ta, Casey N, Liu, Cong, Sung, Cynthia, Butler, Alex M, Stewart, Latoya A, Ena, Lyudmila, Rogers, James R, Lee, Junghwan, Ostropolets, Anna, Ryan, Patrick B, Liu, Hao, Lee, Shing M, Elkind, Mitchell S V, Weng, Chunhua
DOI: 10.1093/jamia/ocaa276
With the growing demand for sharing clinical trial data, scalable methods to enable privacy protective access to high-utility data are needed. Data synthesis is one such method. Sequential trees are commonly used to synthesize health data. It is hypothesized that the utility of the generated data is dependent on the variable order. No assessments of the impact of variable order on synthesized clinical trial data have been performed thus far [...]
Author(s): Emam, Khaled El, Mosquera, Lucy, Zheng, Chaoyi
DOI: 10.1093/jamia/ocaa249
Real-world data (RWD), defined as routinely collected healthcare data, can be a potential catalyst for addressing challenges faced in clinical trials. We performed a scoping review of database-specific RWD applications within clinical trial contexts, synthesizing prominent uses and themes.
Author(s): Rogers, James R, Lee, Junghwan, Zhou, Ziheng, Cheung, Ying Kuen, Hripcsak, George, Weng, Chunhua
DOI: 10.1093/jamia/ocaa224
To develop a process for translating semi-structured clinical decision support (CDS) into shareable, computer-readable CDS.
Author(s): Michel, Jeremy J, Flores, Emilia J, Dutcher, Lauren, Mull, Nikhil K, Tsou, Amy Y
DOI: 10.1093/jamia/ocaa257
Quantify the integrity, measured as completeness and concordance with a thoracic radiologist, of documenting pulmonary nodule characteristics in CT reports and assess impact on making follow-up recommendations.
Author(s): Lacson, Ronilda, Cochon, Laila, Ching, Patrick R, Odigie, Eseosa, Kapoor, Neena, Gagne, Staci, Hammer, Mark M, Khorasani, Ramin
DOI: 10.1093/jamia/ocaa209