Retraction and replacement of: Using machine learning to improve anaphylaxis case identification in medical claims data.
[This retracts the article DOI: 10.1093/jamiaopen/ooad090.].
Author(s):
DOI: 10.1093/jamiaopen/ooae036
[This retracts the article DOI: 10.1093/jamiaopen/ooad090.].
Author(s):
DOI: 10.1093/jamiaopen/ooae036
The Multi-State EHR-Based Network for Disease Surveillance (MENDS) is a population-based chronic disease surveillance distributed data network that uses institution-specific extraction-transformation-load (ETL) routines. MENDS-on-FHIR examined using Health Language Seven's Fast Healthcare Interoperability Resources (HL7® FHIR®) and US Core Implementation Guide (US Core IG) compliant resources derived from the Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM) to create a standards-based ETL pipeline.
Author(s): Essaid, Shahim, Andre, Jeff, Brooks, Ian M, Hohman, Katherine H, Hull, Madelyne, Jackson, Sandra L, Kahn, Michael G, Kraus, Emily M, Mandadi, Neha, Martinez, Amanda K, Mui, Joyce Y, Zambarano, Bob, Soares, Andrey
DOI: 10.1093/jamiaopen/ooae045
[This corrects the article DOI: 10.1093/jamiaopen/ooae029.].
Author(s):
DOI: 10.1093/jamiaopen/ooae046
Machine learning (ML) will have a large impact on medicine and accessibility is important. This study's model was used to explore various concepts including how varying features of a model impacted behavior.
Author(s): Lee, Stephen B
DOI: 10.1093/jamiaopen/ooae035
The generation of structured documents for clinical trials is a promising application of large language models (LLMs). We share opportunities, insights, and challenges from a competitive challenge that used LLMs for automating clinical trial documentation.
Author(s): Landman, Rogier, Healey, Sean P, Loprinzo, Vittorio, Kochendoerfer, Ulrike, Winnier, Angela Russell, Henstock, Peter V, Lin, Wenyi, Chen, Aqiu, Rajendran, Arthi, Penshanwar, Sushant, Khan, Sheraz, Madhavan, Subha
DOI: 10.1093/jamiaopen/ooae043
To validate and demonstrate the clinical discovery utility of a novel patient-mediated, medical record collection and data extraction platform developed to improve access and utilization of real-world clinical data.
Author(s): Nottke, Amanda, Alan, Sophia, Brimble, Elise, Cardillo, Anthony B, Henderson, Lura, Littleford, Hana E, Rojahn, Susan, Sage, Heather, Taylor, Jessica, West-Odell, Lisandra, Berk, Alexandra
DOI: 10.1093/jamiaopen/ooae041
A data commons is a software platform for managing, curating, analyzing, and sharing data with a community. The Pandemic Response Commons (PRC) is a data commons designed to provide a data platform for researchers studying an epidemic or pandemic.
Author(s): Trunnell, Matthew, Frankenberger, Casey, Hota, Bala, Hughes, Troy, Martinov, Plamen, Ravichandran, Urmila, Shah, Nirav S, Grossman, Robert L, ,
DOI: 10.1093/jamiaopen/ooae025
Electronic health record textual sources such as medication signeturs (sigs) contain valuable information that is not always available in structured form. Commonly processed through manual annotation, this repetitive and time-consuming task could be fully automated using large language models (LLMs). While most sigs include simple instructions, some include complex patterns.
Author(s): Garcia-Agundez, Augusto, Kay, Julia L, Li, Jing, Gianfrancesco, Milena, Rai, Baljeet, Hu, Angela, Schmajuk, Gabriela, Yazdany, Jinoos
DOI: 10.1093/jamiaopen/ooae051
Decision support can improve shared decision-making for breast cancer treatment, but workflow barriers have hindered widespread use of these tools. The goal of this study was to understand the workflow among breast cancer teams of clinicians, patients, and their family caregivers when making treatment decisions and identify design guidelines for informatics tools to better support treatment decision-making.
Author(s): Salwei, Megan E, Reale, Carrie
DOI: 10.1093/jamiaopen/ooae053
Diagnosing rare diseases is an arduous and challenging process in clinical settings, resulting in the late discovery of novel variants and referral loops. To help clinicians, we built IDeRare pipelines to accelerate phenotype-genotype analysis for patients with suspected rare diseases.
Author(s): Harsono, Ivan William, Ariani, Yulia, Benyamin, Beben, Fadilah, Fadilah, Pujianto, Dwi Ari, Hafifah, Cut Nurul
DOI: 10.1093/jamiaopen/ooae052