President's column: interoperability--the 30% solution: from dialog and rhetoric to reality.
Author(s): Fickenscher, Kevin M
DOI: 10.1136/amiajnl-2013-001768
Author(s): Fickenscher, Kevin M
DOI: 10.1136/amiajnl-2013-001768
Author(s): Hsu, William, Markey, Mia K, Wang, May D
DOI: 10.1136/amiajnl-2013-002315
Author(s): Ohno-Machado, Lucila
DOI: 10.1136/amiajnl-2013-002368
With the objective of bringing clinical decision support systems to reality, this article reviews histopathological whole-slide imaging informatics methods, associated challenges, and future research opportunities.
Author(s): Kothari, Sonal, Phan, John H, Stokes, Todd H, Wang, May D
DOI: 10.1136/amiajnl-2012-001540
Author(s): Fickenscher, Kevin
DOI: 10.1136/amiajnl-2013-002170
Author(s): Ohno-Machado, Lucila, Nadkarni, Prakash, Johnson, Kevin
DOI: 10.1136/amiajnl-2013-002214
To develop, evaluate, and share: (1) syntactic parsing guidelines for clinical text, with a new approach to handling ill-formed sentences; and (2) a clinical Treebank annotated according to the guidelines. To document the process and findings for readers with similar interest.
Author(s): Fan, Jung-wei, Yang, Elly W, Jiang, Min, Prasad, Rashmi, Loomis, Richard M, Zisook, Daniel S, Denny, Josh C, Xu, Hua, Huang, Yang
DOI: 10.1136/amiajnl-2013-001810
The integration and visualization of multimodal datasets is a common challenge in biomedical informatics. Several recent studies of The Cancer Genome Atlas (TCGA) data have illustrated important relationships between morphology observed in whole-slide images, outcome, and genetic events. The pairing of genomics and rich clinical descriptions with whole-slide imaging provided by TCGA presents a unique opportunity to perform these correlative studies. However, better tools are needed to integrate the vast [...]
Author(s): Gutman, David A, Cobb, Jake, Somanna, Dhananjaya, Park, Yuna, Wang, Fusheng, Kurc, Tahsin, Saltz, Joel H, Brat, Daniel J, Cooper, Lee A D
DOI: 10.1136/amiajnl-2012-001469
The aim of this paper is to summarize concerns with the de-identification standard and methodologies established under the Health Insurance Portability and Accountability Act (HIPAA) regulations, and report some potential policies to address those concerns that were discussed at a recent workshop attended by industry, consumer, academic and research stakeholders.
Author(s): McGraw, Deven
DOI: 10.1136/amiajnl-2012-000936
Author(s): Goodman, Kenneth W, Adams, Samantha, Berner, Eta S, Embi, Peter J, Hsiung, Robert, Hurdle, John, Jones, Dixie A, Lehmann, Christoph U, Maulden, Sarah, Petersen, Carolyn, Terrazas, Enrique, Winkelstein, Peter
DOI: 10.1136/amiajnl-2012-001035