President's column: AMIA -- expanding and extending our reach.
Author(s): Fickenscher, Kevin M
DOI: 10.1136/amiajnl-2013-001649
Author(s): Fickenscher, Kevin M
DOI: 10.1136/amiajnl-2013-001649
To evaluate the validity of, characterize the usage of, and propose potential research applications for International Classification of Diseases, Ninth Revision (ICD-9) tobacco codes in clinical populations.
Author(s): Wiley, Laura K, Shah, Anushi, Xu, Hua, Bush, William S
DOI: 10.1136/amiajnl-2012-001557
Epistasis has been historically used to describe the phenomenon that the effect of a given gene on a phenotype can be dependent on one or more other genes, and is an essential element for understanding the association between genetic and phenotypic variations. Quantifying epistasis of orders higher than two is very challenging due to both the computational complexity of enumerating all possible combinations in genome-wide data and the lack of [...]
Author(s): Hu, Ting, Chen, Yuanzhu, Kiralis, Jeff W, Collins, Ryan L, Wejse, Christian, Sirugo, Giorgio, Williams, Scott M, Moore, Jason H
DOI: 10.1136/amiajnl-2012-001525
This study was to assess whether active learning strategies can be integrated with supervised word sense disambiguation (WSD) methods, thus reducing the number of annotated samples, while keeping or improving the quality of disambiguation models.
Author(s): Chen, Yukun, Cao, Hongxin, Mei, Qiaozhu, Zheng, Kai, Xu, Hua
DOI: 10.1136/amiajnl-2012-001244
Effective clinical communication is critical to providing high-quality patient care. Hospitals have used different types of interventions to improve communication between care teams, but there have been few studies of their effectiveness.
Author(s): Wu, Robert C, Lo, Vivian, Morra, Dante, Wong, Brian M, Sargeant, Robert, Locke, Ken, Cavalcanti, Rodrigo, Quan, Sherman D, Rossos, Peter, Tran, Kim, Cheung, Mark
DOI: 10.1136/amiajnl-2012-001160
The goal of this work was to evaluate machine learning methods, binary classification and sequence labeling, for medication-attribute linkage detection in two clinical corpora.
Author(s): Li, Qi, Zhai, Haijun, Deleger, Louise, Lingren, Todd, Kaiser, Megan, Stoutenborough, Laura, Solti, Imre
DOI: 10.1136/amiajnl-2012-001487
Author(s): Fickenscher, Kevin
DOI: 10.1136/amiajnl-2012-001515
Private data analysis-the useful analysis of confidential data-requires a rigorous and practicable definition of privacy. Differential privacy, an emerging standard, is the subject of intensive investigation in several diverse research communities. We review the definition, explain its motivation, and discuss some of the challenges to bringing this concept to practice.
Author(s): Dwork, Cynthia, Pottenger, Rebecca
DOI: 10.1136/amiajnl-2012-001047
Author(s): Ohno-Machado, Lucila
DOI: 10.1136/amiajnl-2012-001513
To determine how well statistical text mining (STM) models can identify falls within clinical text associated with an ambulatory encounter.
Author(s): McCart, James A, Berndt, Donald J, Jarman, Jay, Finch, Dezon K, Luther, Stephen L
DOI: 10.1136/amiajnl-2012-001334